PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan003037
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HD-ZIP
Protein Properties Length: 291aa    MW: 33905.4 Da    PI: 4.569
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55105173PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-77575PU_unrefplantGDBView CDS
PUT-183a-Artemisia_annua-77576PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.4e-1967120356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                k+++++ +q++ Le+ Fe+++++  e++ +LAk+l+L+ rqV +WFqNrRa+ k
  Aan003037  67 KKRRLSVDQVQFLEKSFEEENKLEPERKIQLAKELNLQPRQVAIWFQNRRARCK 120
                566899**********************************************99 PP
2HD-ZIP_I/II127.55.5e-4166157192
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                  ekkrrls +qv++LE+sFeee+kLeperK +la+eL+lqprqva+WFqnrRAR ktkqlEkdy+ L ++yd+lk+e + L+k++e+L++e++
    Aan003037  66 EKKRRLSVDQVQFLEKSFEEENKLEPERKIQLAKELNLQPRQVAIWFQNRRARCKTKQLEKDYDILNSSYDKLKSEFDCLQKHNEKLKHEVQ 157
                  69**************************************************************************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.84E-2050124IPR009057Homeodomain-like
PROSITE profilePS5007117.47562122IPR001356Homeobox domain
SMARTSM003892.6E-1965126IPR001356Homeobox domain
CDDcd000866.81E-1767123No hitNo description
PfamPF000465.1E-1667120IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.7E-1969129IPR009057Homeodomain-like
PROSITE patternPS00027097120IPR017970Homeobox, conserved site
PfamPF021837.3E-17122163IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MEGGMVFEAM LQNQRLNFSS DQGFDSQWGS NSFHGENTNT TKSLSGPHEK EENSDEDYGK  60
CFRQPEKKRR LSVDQVQFLE KSFEEENKLE PERKIQLAKE LNLQPRQVAI WFQNRRARCK  120
TKQLEKDYDI LNSSYDKLKS EFDCLQKHNE KLKHEVQMLK EKLHQREQGS IPNELPTQEL  180
DSNAQETKPS PISIQTWSNE PKMVICKQEY ANSVSTKSDI IDSYSPDGNH SSFLEPCDSS  240
NVFENQSDFS QDEEDNVAIL RCPKIEYESY IDPNEGSLGY PIEDQPFWLW P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1114122RRARCKTKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.8210.0leaf| trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994522.11e-180homeobox-leucine zipper protein ATHB-54-like
TrEMBLA0A2U1NYF40.0A0A2U1NYF4_ARTAN; HD-ZIP protein
STRINGXP_006476659.16e-77(Citrus sinensis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.14e-45homeobox 1