PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan003874
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 226aa    MW: 25966.9 Da    PI: 9.0838
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41954499PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-50809PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.33.4e-12101144151
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                +  +GV++ k + +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Aan003874 101 CVMRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 144
                568***96.5.7*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-6101145IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-8103147IPR016177DNA-binding domain
SMARTSM003801.1E-4104159IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-6104148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MVSIRRQRLI KIYGRSPSLD LLPNEDGHAP SWLQNTRQVS IFPTPFIGVD QSPEAEKTNS  60
KEPESSNFNE SGSPTEQPTQ HPVLKRRKRH RRKHFENQEP CVMRGVYYKN MKWQAAIKVD  120
KKQIHLGTVG SQEEAARLYD RAAFMCGREP NFELTSEEKD ELSKLSWDDF LTMTRSAINN  180
KKHQRRVSSR MKFEHVENNS DQKTEANQGG NSFSGSDDAE TSALND
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023755070.11e-114ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_023755071.11e-114ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_023755072.11e-114ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A2U1KPK51e-156A0A2U1KPK5_ARTAN; AP2-like ethylene-responsive transcription factor
STRINGXP_010242670.14e-67(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.28e-47ERF family protein