PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004072
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 209aa    MW: 22385.5 Da    PI: 9.0114
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41956535PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-21524PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023109131123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++C+++F++   L  H r+H
  Aan004072 109 HECSICHRTFPTGQALGGHKRRH 131
                78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.6E-135277IPR007087Zinc finger, C2H2
SuperFamilySSF576679.14E-55278No hitNo description
SMARTSM003550.0675375IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.1825380IPR007087Zinc finger, C2H2
PROSITE patternPS0002805575IPR007087Zinc finger, C2H2
SuperFamilySSF576671.29E-5106133No hitNo description
PROSITE profilePS501579.203109131IPR007087Zinc finger, C2H2
PfamPF139123.1E-13109133IPR007087Zinc finger, C2H2
SMARTSM003550.059109131IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280111131IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
XISSTVSEPQ HPTEEEYLAF CLMLLSRGGT GVGSQKPTPT QAQSPPRPPL VVHKCTVCNK  60
GFGSYQALGG HKASHRKNTS DDQHHHPTTS NTTTTSASSS VLKPSGRIHE CSICHRTFPT  120
GQALGGHKRR HYDGGNNSGP AASGVTTSEK TSSSTHSQPR DFDLNLLPAA SPLGLNVDFL  180
KKSQLFEEQE VESPHPAKKQ RFSGGVANY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.565940.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022028019.12e-78zinc finger protein ZAT10-like
TrEMBLA0A251V6764e-77A0A251V676_HELAN; Putative zinc finger protein
STRINGVIT_03s0091g00690.t016e-57(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.13e-38salt tolerance zinc finger