PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004102
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 207aa    MW: 23000.8 Da    PI: 9.5481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41948860PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-60506PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.98.3e-212273156
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
               ++++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g+
  Aan004102 22 PHFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDSAAREFRGA 73
               689*******.**********8...557*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.32E-322281No hitNo description
PfamPF008472.0E-142272IPR001471AP2/ERF domain
SMARTSM003801.3E-372386IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-222381IPR016177DNA-binding domain
PROSITE profilePS5103223.7492380IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-322380IPR001471AP2/ERF domain
PRINTSPR003673.9E-112435IPR001471AP2/ERF domain
PRINTSPR003673.9E-114662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MAPKQEKTTE NTNTLNGVTK EPHFRGVRKR PWGRYAAEIR DPGKKSRVWL GTFDTAEEAA  60
RAYDSAAREF RGAKAKTNFP IFEDDVLKQQ RSPSQTSTVD SDSHAVPLLD LNLSCANPAP  120
PPPPFVVQFP YHRRYPAVTV AGAGFYAPPA NHQVFYFDGV PRSNFVYKQS VTKSDDSNGS  180
SVVDVKPAPP PRRVEIDLNF PPAPELF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-211981164ATERF1
3gcc_A1e-211981164ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.60910.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022016243.13e-72ethylene-responsive transcription factor 11-like
TrEMBLA0A2U1QDW31e-150A0A2U1QDW3_ARTAN; Erf domain protein 9
STRINGSolyc10g009110.1.14e-49(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-29ethylene responsive element binding factor 4