PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004197
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 199aa    MW: 21655.1 Da    PI: 4.709
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41907161PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-61693PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-184696155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               + y+GVr+++ +g+W +e+r+p++   + r++lg+f tae Aa+a++ a+++l+g
  Aan004197 46 PVYRGVRQRS-SGKWICEVREPYK---QSRIWLGTFPTAERAARAHDVAALALRG 96
               68*****999.7*********865...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.2E-124696IPR001471AP2/ERF domain
PROSITE profilePS5103222.347104IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2047106IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.6E-3147105IPR001471AP2/ERF domain
SMARTSM003808.9E-2747111IPR001471AP2/ERF domain
CDDcd000185.81E-2948106No hitNo description
PRINTSPR003671.8E-94859IPR001471AP2/ERF domain
PRINTSPR003671.8E-97086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
SYGSNNWGSS EMDVGESSGT SEEMMLAASN PKKRAGRKKF QETLHPVYRG VRQRSSGKWI  60
CEVREPYKQS RIWLGTFPTA ERAARAHDVA ALALRGRSAC LNFADSWSLP SPASLDPKDI  120
RKAAVEAAET FRPSEDGGGS NIVGTVEYGG NVGYVDEEEE FGMPGLLVNM AEGLMLPPPP  180
SYGGYDEAEY GGDMSLWSY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-15451111279Ethylene-responsive transcription factor ERF096
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.46600.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates abscisic acid- and dehydration-inducible transcription. CBF/DREB1 factors play a key role in freezing tolerance and cold acclimation. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By high-salt stress, drought stress and abscisic acid (ABA) treatment. {ECO:0000269|PubMed:11798174, ECO:0000269|PubMed:12376631}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023753347.11e-109dehydration-responsive element-binding protein 1D-like
SwissprotQ9FJ933e-67DRE1D_ARATH; Dehydration-responsive element-binding protein 1D
TrEMBLA0A2U1MY561e-141A0A2U1MY56_ARTAN; C-repeat-binding factor 4
STRINGMigut.F01150.1.p3e-79(Erythranthe guttata)
STRINGXP_010278524.13e-79(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-54C-repeat-binding factor 4
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Guttikonda SK, et al.
    Overexpression of AtDREB1D transcription factor improves drought tolerance in soybean.
    Mol. Biol. Rep., 2014. 41(12): p. 7995-8008
    [PMID:25192890]
  3. Zhang T, et al.
    Overexpression of a NF-YB3 transcription factor from Picea wilsonii confers tolerance to salinity and drought stress in transformed Arabidopsis thaliana.
    Plant Physiol. Biochem., 2015. 94: p. 153-64
    [PMID:26093308]
  4. Carlow CE, et al.
    Nuclear localization and transactivation by Vitis CBF transcription factors are regulated by combinations of conserved amino acid domains.
    Plant Physiol. Biochem., 2017. 118: p. 306-319
    [PMID:28675818]
  5. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]