PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004484
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 172aa    MW: 19190.8 Da    PI: 8.5175
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41927793PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-106282PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.00144668123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C+ C++ F++   L  H  +H
  Aan004484 46 FECKTCNRQFPSFQALGGHRASH 68
               89**********99999998887 PP
2zf-C2H210.90.001491113123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ++C++Cg  Fs    L  H+r+H
  Aan004484  91 HECSICGLEFSIGQALGGHMRRH 113
                78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.34E-844113No hitNo description
PfamPF139122.8E-134570IPR007087Zinc finger, C2H2
SMARTSM003550.164668IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8274673IPR007087Zinc finger, C2H2
PROSITE patternPS0002804868IPR007087Zinc finger, C2H2
PfamPF139129.1E-1091114IPR007087Zinc finger, C2H2
PROSITE profilePS501579.16291118IPR007087Zinc finger, C2H2
SMARTSM003550.3291113IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028093113IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MVYLPMKRFR EAELDTAITN MANCLMLLSG GPSSHEPHDN SSNRVFECKT CNRQFPSFQA  60
LGGHRASHKK PRLEGDLTHG TNLVPPKPKS HECSICGLEF SIGQALGGHM RRHRTTATND  120
NQFSASSDLS NPAVKKVNSR RIFSLDLNLT PLENDLESRF EKVVPTTIEL FI
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.101610.0trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in leaves. {ECO:0000269|PubMed:9132053}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024991277.19e-94zinc finger protein ZAT11-like
SwissprotQ9SLD43e-39ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2U1LZ131e-118A0A2U1LZ13_ARTAN; Zinc finger, C2H2
STRINGXP_009762518.11e-63(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.11e-41C2H2 family protein