PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004553
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bZIP
Protein Properties Length: 165aa    MW: 18990.2 Da    PI: 6.1007
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41891618PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-149061PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.11.9e-132785563
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
               ++ +r+q+NRe+ArrsR RK++ ++ L++ + ++++ N++   +++  +++  ++++e+
  Aan004553 27 RKRKRMQSNRESARRSRMRKQKHLDDLTDQINQIKKDNSQIMTTINVTTQQFVQVEAEN 85
               6789*************************************999999888887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-182387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.6112588IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-102778No hitNo description
SuperFamilySSF579593.19E-122779No hitNo description
PfamPF001701.6E-102777IPR004827Basic-leucine zipper domain
CDDcd147024.10E-192878No hitNo description
PROSITE patternPS0003603045IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MATSSGNSSQ IHMSGNSGSE EDLMDQRKRK RMQSNRESAR RSRMRKQKHL DDLTDQINQI  60
KKDNSQIMTT INVTTQQFVQ VEAENSVLMA QMGELSQRLD YLNEIINMMN SNCPTTTTTS  120
THCNNSTSGM FEFENSHNDF INNPWNMMYF NQQPIMAAVG EMLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12647RKRKRMQSNRESARRSRMRKQK
23946RRSRMRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.10560.0leaf
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269|PubMed:23461773}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024970416.17e-80bZIP transcription factor 11-like
SwissprotC0Z2L55e-43BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A251RVY46e-77A0A251RVY4_HELAN; Putative basic-leucine zipper domain-containing protein
STRINGGLYMA12G04440.11e-50(Glycine max)
STRINGXP_002510435.11e-50(Ricinus communis)
STRINGXP_004291844.12e-50(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-44basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]