PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004559
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 164aa    MW: 17776.9 Da    PI: 11.0462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41909373PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-140837PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.91.4e-14121157243
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAa 43 
                 y+GVr+++ +g+W+AeIrdp+    + +r++lg+f t  eA+
  Aan004559 121 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFET-AEAR 157
                59*******.**********94....36**********.8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.04E-18120155No hitNo description
SMARTSM003802.8E-9121163IPR001471AP2/ERF domain
PROSITE profilePS5103216.436121156IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-19121156IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-12121155IPR016177DNA-binding domain
PfamPF008478.3E-10121157IPR001471AP2/ERF domain
PRINTSPR003673.3E-9122133IPR001471AP2/ERF domain
PRINTSPR003673.3E-9144160IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDNRLTNKFN DQPSTSIHHH QPPPSRRLTT HEEAAAMVAT LRNVISGSTN SLSIFLGSYD  60
AVPNPQTCRV CGISGCLGCN FFTHNSNHNN VGASAGVGVA VQTGARAEAR VGGPIKKKKK  120
NYRGVRQRPW GKWAAEIRDP RKAARVWLGT FETAEARVGG PIKX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-14118155240ATERF1
3gcc_A2e-14118155240ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.55760.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023729970.16e-46ethylene-responsive transcription factor ERF109-like
TrEMBLA0A221CFB91e-41A0A221CFB9_TARKO; ERF
STRINGMigut.B00347.1.p2e-34(Erythranthe guttata)
STRINGXP_010030650.15e-34(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-25redox responsive transcription factor 1