PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004560
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 164aa    MW: 18542.4 Da    PI: 9.3793
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41913950PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-27160989PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000167495122
               EEETTTTEEESSHHHHHHHHHH CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
               ++C++C+ +F +  +L++H  t
  Aan004560 74 FVCKICHITFGTLPHLNQHSET 95
               89*****************766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004510.02971105IPR003604Zinc finger, U1-type
SuperFamilySSF576671.6E-572110No hitNo description
SMARTSM003550.197498IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002807698IPR007087Zinc finger, C2H2
SMARTSM004510.0088113147IPR003604Zinc finger, U1-type
SuperFamilySSF576671.36E-6114145No hitNo description
SMARTSM003551.5116140IPR015880Zinc finger, C2H2-like
PfamPF128741.4E-5116140No hitNo description
PROSITE patternPS000280118140IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MDEDMMTLHN IMPVELAIRR EMEYRSQMEV LKNRRLVNLN PLLPSQVHPT SQHALKRKEP  60
STSGTALGRR STGFVCKICH ITFGTLPHLN QHSETSRHKG NLLQLKKQGK NVSCPFACQL  120
CDISCSSGLV MADHLRGTKH STMLQDVENA KRARAEEVYA ANMY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.194550.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994622.11e-83uncharacterized protein LOC112527980
RefseqXP_024994623.11e-83uncharacterized protein LOC112527980
TrEMBLA0A2U1PNZ71e-120A0A2U1PNZ7_ARTAN; Zinc finger, C2H2