PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan004602

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bZIP

Protein Properties

Length: 158aa MW: 17233.2 Da PI: 10.6294

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41968397	PU_ref	Unigene	View CDS
PUT-183a-Artemisia_annua-60614	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	69.3	6e-22	26	88	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae eeL +kv++L+ eN +Lk+e+++l+ ++a+lk ++ Aan004602 26 ERELKRERRKQSNRESARRSRLRKQAEAEELGTKVEALTVENLKLKSEVNQLTINAANLKHQN 88 89**********************************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.9E-15	23	87	No hit	No description
SMART	SM00338	5.0E-18	26	90	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.5E-20	26	88	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.599	28	91	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.31E-11	29	86	No hit	No description
CDD	cd14702	3.73E-14	31	78	No hit	No description
PROSITE pattern	PS00036	0	33	48	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
XKSPNMISAI VTMVPNTVVL QVHSNERELK RERRKQSNRE SARRSRLRKQ AEAEELGTKV 60 EALTVENLKL KSEVNQLTIN AANLKHQNAK LLEKLKNAQL EQATEDPRPT ANLLSTVEKS 120 LGSGSVVRND GEANSSGSGA PLRQLLDASP RADAVAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	48	RRSRLRK
2	42	49	RRSRLRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By light.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024989074.1	1e-68	common plant regulatory factor 1-like isoform X2
Refseq	XP_024989075.1	1e-68	common plant regulatory factor 1-like isoform X3
Swissprot	Q99089	2e-40	CPRF1_PETCR; Common plant regulatory factor 1
TrEMBL	A0A2U1NYL5	1e-102	A0A2U1NYL5_ARTAN; Basic-leucine zipper domain-containing protein
STRING	Solyc01g095460.2.1	4e-38	(Solanum lycopersicum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	7e-40	G-box binding factor 3

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115] Feldbrügge M,Hahlbrock K,Weisshaar B The transcriptional regulator CPRF1: expression analysis and gene structure. Mol. Gen. Genet., 1996. 251(6): p. 619-27 [PMID:8757392]