PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan004724
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 140aa    MW: 15437.6 Da    PI: 6.3844
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41901376PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-127546PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000613322255
               HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                L++l+P +    +k   Ka +L + ++Y++sLq
  Aan004724  3 LLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 32
               599*****9....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.794131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-10249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.05E-9247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.24E-4436No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MKLLQDLVPG CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPEVN IDIDRLVFKD  60
VLHSRGSISN PAFGFSHTLN PSHSYSHGSL PGVPATTAQL HAIHPQPVWD NDLHNLLQMG  120
YDVNPGTNNL GPNGREKMDL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.34320.0leaf| trichome
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021977673.12e-83transcription factor bHLH74 isoform X3
SwissprotQ6NKN91e-44BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A2U1MCV97e-99A0A2U1MCV9_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGVIT_18s0001g08600.t011e-53(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-47bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]