PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan005635
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GRF
Protein Properties Length: 352aa    MW: 38906.9 Da    PI: 7.4941
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55102199PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-13367PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.81.9e-2383127145
        WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                d+epgrCrRtDG kWRC +++++++k+CErH+hrgr+rsrk++e+
  Aan005635  83 DPEPGRCRRTDGQKWRCAKDAYPDSKYCERHMHRGRNRSRKPVES 127
                79****************************************986 PP
2QLQ61.32.6e-212156237
        QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
               +FT+ Q+q+L++Q+l+yKyL+a++PvP +L+++i++
  Aan005635 21 PFTPVQWQELEHQALIYKYLVAGVPVPYDLVVPIRR 56
               9*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.3E-112056IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.7372156IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.3E-152155IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.00583127IPR014977WRC domain
PfamPF088797.7E-2084126IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MSGSTTVASS GGGGMSGYRP PFTPVQWQEL EHQALIYKYL VAGVPVPYDL VVPIRRSLEA  60
LSARFFNHPN SLGYCSYYGK KFDPEPGRCR RTDGQKWRCA KDAYPDSKYC ERHMHRGRNR  120
SRKPVESQTA SQSLSTAVSQ VTTVSSTGAN RSYQSLGSGS FQNSNLYSNS NSGSLDFGSN  180
VSKLQLNANT YGLNNNNFRF DQGLTVDVDD RNYSSGASSA RGLGMESNAD STWRLVPAQL  240
PTASLMESRN DSYLQTKSPQ LTMVNAFDPI LDAIPVSKIN QQHCLFGNKI DSPVEPKHEQ  300
HMMRPFFDEW PEAREQWSGL DVDSKNSFST TQLSMSTASE YSAGNECSPN DA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022001244.10.0growth-regulating factor 5-like
RefseqXP_022001245.10.0growth-regulating factor 5-like
TrEMBLA0A2U1LM700.0A0A2U1LM70_ARTAN; Growth-regulating factor 4
STRINGSolyc08g075950.1.11e-147(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.13e-48growth-regulating factor 5