PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan007224

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Dof

Protein Properties

Length: 255aa MW: 28301.2 Da PI: 10.131

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-71510	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126	1.2e-39	30	90	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + Aan007224 30 PHEALKCPRCDSLNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 90 57899*****************************************************875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.2E-34	32	88	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-27	32	88	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.413	34	88	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	36	72	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence Send to blast
MAAPGVRVME KPMQLQQHQQ QQQQQQPPPP HEALKCPRCD SLNTKFCYYN NYSLSQPRHF 60 CKACKRYWTR GGTLRNVPVG GGCRKNKRIK RPITTTTTTL PVAATLSQAN HRTNQNHSPN 120 PNLDHNHIPP STTSNSTSNH HLNPMFYGLL PQNPSYPRFD TRVSNVNENL VSGYDLIQTH 180 MNANGLGFSS TGTGVSSLET NHGHNSNINF SSYLNNSSMY GGGSTSSSTS APTIASLLTS 240 SINQQQRYMG FARYX

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022035990.1	1e-109	dof zinc finger protein DOF1.4-like
TrEMBL	A0A142IXE2	1e-151	A0A142IXE2_CHRMO; DOF transcription factor 9 (Fragment)
STRING	VIT_10s0003g00040.t01	6e-60	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	9e-36	Dof family protein