PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan007250
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 254aa    MW: 28520.4 Da    PI: 8.3221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55062782PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-157913PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.97.6e-1386133355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                ++h+e+ErrRR+riN  +++Lr l+P +      K++Ka+ L ++++ Ik+L+
  Aan007250  86 KSHSEAERRRRERINAHLDTLRGLVPCN-----NKMDKATLLAEVIRQIKQLK 133
                58*************************7.....5*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.17183132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-1086132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.5E-1486139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-1387135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-1289138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.02E-496133No hitNo description
CDDcd048732.63E-4171231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
XSRERMEFYG WTNPGFSNLG PNGFDGSLMN SSAFNEDYGN VDGLFMKSSE SLVLDNEKSE  60
LVKGQSKVIG KKIGSISDEK AVAALKSHSE AERRRRERIN AHLDTLRGLV PCNNKMDKAT  120
LLAEVIRQIK QLKVNATQAS TGLLMPEDVD EVKIEKLDQL SVNGSIIFHA SFCCKHRPEL  180
LTDVRKALVD LKVHMERAQL SYLGDHVKII FDFMANEDLV TSVREALTAV IEKGSISPEY  240
SLRTLPNKRR RYCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19196ERRRRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.190010.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022017273.11e-122transcription factor bHLH30-like
TrEMBLA0A2U1Q4930.0A0A2U1Q493_ARTAN; ACT domain, Myc-type, basic helix-loop-helix (BHLH) domain protein
STRINGXP_002522566.15e-62(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.18e-28bHLH family protein