PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan007251
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 254aa    MW: 28704.2 Da    PI: 9.8198
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55084594PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-19315PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.18.6e-081861445
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     WT+ E +l+ +a +++ ++   +W ++a++++ g+t  +++  + 
        Aan007251 18 WTPIENKLFENALAKFDKDtpeRWQKVAEMVP-GKTVADVVRQYK 61
                     ********************************.******998886 PP
2Myb_DNA-binding46.87e-15131175347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r    +Rt+ q+ s+ qky
        Aan007251 131 PWTEEEHKLFLLGLKKYGKGDWRNISRNYVVTRTPTQVASHAQKY 175
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.3641366IPR017884SANT domain
SMARTSM007172.1E-91466IPR001005SANT/Myb domain
SuperFamilySSF466893.01E-111671IPR009057Homeodomain-like
PfamPF002491.5E-61861IPR001005SANT/Myb domain
CDDcd001671.20E-71863No hitNo description
PROSITE profilePS5129420.727124180IPR017930Myb domain
SuperFamilySSF466895.91E-17125179IPR009057Homeodomain-like
TIGRFAMsTIGR015573.8E-18127179IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.605.1E-12128175IPR009057Homeodomain-like
SMARTSM007179.3E-13128178IPR001005SANT/Myb domain
CDDcd001671.68E-11131176No hitNo description
PfamPF002491.1E-12131175IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MSNSSSHMMG ESLKSTIWTP IENKLFENAL AKFDKDTPER WQKVAEMVPG KTVADVVRQY  60
KELEDDVSSI EAGFYPKYRY NNNSTNCGFT LEYGNNYGFD RCKSSPYCAG GRPSPVAAGR  120
PVEQERKKGV PWTEEEHKLF LLGLKKYGKG DWRNISRNYV VTRTPTQVAS HAQKYFIRQL  180
SGGKDKRRAS IHDITTVNIQ EXYARHQNIK EPPHPSNASS NGINQIAKPP LWLLIKLGGS  240
NLFMCPKYGG NTFG
Expression -- Description ? help Back to Top
Source Description
UniprotDEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}.
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023739233.11e-121transcription factor DIVARICATA-like isoform X1
SwissprotQ8S9H75e-97DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2U1M8361e-141A0A2U1M836_ARTAN; Transcription factor DIVARICATA
STRINGXP_009603384.15e-96(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.14e-71MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]