PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan007702

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Dof

Protein Properties

Length: 240aa MW: 27091.4 Da PI: 8.7986

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55193662	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.6	4.7e-37	31	89	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++kcprC+s ntkfCyynny+lsqPr++Ck+CrryWtkGG lrnvPvGgg rk k+ss Aan007702 31 HNTKCPRCESLNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGVLRNVPVGGGIRKTKRSS 89 5689***************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.5E-32	32	87	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.528	33	87	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-23	34	83	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	35	71	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
XEPNKCKIIH PINTQGGIGR FFTGDANQQF HNTKCPRCES LNTKFCYYNN YNLSQPRHYC 60 KNCRRYWTKG GVLRNVPVGG GIRKTKRSSK PKSKTKTNTS ITSSSTVEHK SSNSGHSSNA 120 SSSHAATTNT NKTDVSSNST QGMMLSFNQV TNDDQVTLNQ SKQSSSQDMG MFQTHQENEI 180 QWTDAHFKMP EIRSSSMFIN PSDEGLFDLT GTVNDDLSFW NQSQWNNAED QDHHQLNYLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024973233.1	4e-50	dof zinc finger protein DOF5.4-like
TrEMBL	A0A2U1MRY5	1e-112	A0A2U1MRY5_ARTAN; Zinc finger, Dof-type

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	7e-31	OBF binding protein 4