PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan007883
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 235aa    MW: 26143 Da    PI: 9.144
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55092825PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.1e-1179126455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Aan007883  79 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 126
                8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.34E-873130No hitNo description
SuperFamilySSF474591.13E-1773142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.82875125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-1875142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-879126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.3E-1181131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
XISKKRRDDD ELSKGLSTSS NSMLDSDGKR LKTLALENEN SESKPEGERS SGKKAEKPAE  60
PSKQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG KALVLDEIIN  120
YIQSLQQQVE FLSTKLEAVT SRSQPSPQGY PSKDYGQQTF EMAGVPFGSN PQENSAEDHH  180
QNGCTCKLVA ALKEQHNTTI NGNKLSLRRC HEIGKLSYIH GANDSETAAK KLHRL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.54850.0trichome
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994923.11e-101transcription factor BHLH094
SwissprotQ69WS32e-59BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A2U1P6Y91e-115A0A2U1P6Y9_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGXP_009776012.13e-75(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-60BIG PETAL P