PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008125
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 227aa    MW: 25831.1 Da    PI: 4.6924
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41933195PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.41.3e-1121102286
   trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                Wt +e l L++    +e + r + +  ++W+ + +++ +  ++r+ +qC+ kw++l  +ykkik++ +k++   s +  +f+ +e
  Aan008125  21 WTVEESLILVNEIAAIEADCRGTLSSFQKWKIIVENCNALEVNRNLNQCRRKWDSLLSDYKKIKQSGSKKA---SFNNELFKAIE 102
                *****************************************************************999963...44556777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.2E-52079IPR009057Homeodomain-like
PfamPF138371.3E-1120103No hitNo description
PROSITE profilePS500907.2822177IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MEHETGTTSS LRTRSKAAPD WTVEESLILV NEIAAIEADC RGTLSSFQKW KIIVENCNAL  60
EVNRNLNQCR RKWDSLLSDY KKIKQSGSKK ASFNNELFKA IERYVREFEE GGGGEYDTDP  120
EDGDEDDGMD LPLADVVHFG SKSQRAKVTA PQKRTVEVKP KPVRHPKSED MEIEECSSEQ  180
RVDRHTNTFD ENTGYVQISR EEQEQILGEK LREXAQLIEA IVNGNNX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022025287.12e-99trihelix transcription factor GTL1-like
TrEMBLA0A2U1MRQ41e-166A0A2U1MRQ4_ARTAN; Homeodomain-like, Myb-like domain protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.13e-38sequence-specific DNA binding transcription factors