PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan008326

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Nin-like

Protein Properties

Length: 221aa MW: 23715.3 Da PI: 9.595

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55094950	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.5	7.3e-30	117	168	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk +gvc+T+LKriCRq+GI+RWP+Rki+++ Aan008326 117 AEKNVSLSVLQQYFSGSLKDAAKAIGVCPTTLKRICRQHGISRWPSRKINKV 168 589***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.268	101	188	IPR003035	RWP-RK domain
Pfam	PF02042	6.2E-27	120	168	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence Send to blast
VXLPASMKGS TEQQLLLNNL SSTMQRICKS LRTVSDAELS GVGGSDVGLQ RGLDESRLPL 60 ELSSSGTEQK YMEESSTPGD QVSGNATDST DIMIGARPPD QTAGGSRRQS EEKRSTAEKN 120 VSLSVLQQYF SGSLKDAAKA IGVCPTTLKR ICRQHGISRW PSRKINKVNR SLKKIQTVLD 180 SVQGVEGGLK FDPTTGGLVA ANTVIQDLDA QKVQRFPITA X

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024995704.1	1e-122	protein NLP9-like isoform X1
Refseq	XP_024995706.1	1e-122	protein NLP9-like isoform X1
Refseq	XP_024995708.1	1e-122	protein NLP9-like isoform X3
Refseq	XP_024995709.1	1e-123	protein NLP9-like isoform X4
Swissprot	Q9M1B0	1e-67	NLP9_ARATH; Protein NLP9
TrEMBL	A0A2U1KK07	1e-139	A0A2U1KK07_ARTAN; NIN-like protein
STRING	XP_004289276.1	8e-87	(Fragaria vesca)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	5e-70	Nin-like family protein