PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan008412
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GRF
Protein Properties Length: 218aa    MW: 24732.5 Da    PI: 9.9014
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41942905PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC67.32e-21119163145
        WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                d+ep+rCrRtDGKkWRC ++  ++ k+CE+H h+ rsrsrk++e+
  Aan008412 119 DPEPWRCRRTDGKKWRCAKECAPDLKYCEKHSHKTRSRSRKPVES 163
                79****************************************986 PP
2QLQ522.1e-1872101332
        QLQ   3 FTaaQlqlLksQilAyKyLaanqPvPpeLl 32 
                FTa+Q+q+L++Q ++yKy++a++PvPp+Ll
  Aan008412  72 FTATQWQELERQTMIYKYIMASVPVPPQLL 101
                ****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.5E-770106IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166618.62871106IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088808.2E-1472101IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.453119163IPR014977WRC domain
PfamPF088794.0E-17120162IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MGNQNRTNGG GSGGVHSQPP SFQFNLGLNN EPSSYPYKKA NFNSYPYQIY ANSNQLPSGL  60
CSKSSTDGNM LFTATQWQEL ERQTMIYKYI MASVPVPPQL LYTQSNRINL GIRFANGSDP  120
EPWRCRRTDG KKWRCAKECA PDLKYCEKHS HKTRSRSRKP VESQSRNTKD NPTIPCTANQ  180
QNKCSGLFMK NDLFPLSQSX NRFEQPISKG DQLLKQDS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023742400.14e-65growth-regulating factor 8-like isoform X1
TrEMBLA0A2U1MGM51e-155A0A2U1MGM5_ARTAN; WRC domain, Glutamine-Leucine-Glutamine, QLQ, Growth-regulating factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.12e-31growth-regulating factor 2