PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan009008
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 199aa    MW: 22290.8 Da    PI: 7.5052
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55025837PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-96026PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.2e-11135183355
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Aan009008 135 NSHSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 183
                58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.57E-11130187No hitNo description
SuperFamilySSF474592.22E-17130196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.612132182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-17132196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-8135183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-11138188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MGSSENDDSE MGYQYRGEMS SGSMFNNKSS SGSGNLFGPG WDPLENFGTY PLMNQYQPGE  60
LVPKMMVNPS ASPNSNSNNS SREKRRLNPN MNGDNVSEND EKKLRVDSKG KQVSEGSDRK  120
EDYVHMRAKR GQATNSHSLA ERVRREKISE RMKLLQDLVP GCNKITGKAV MLDEIINYVQ  180
SLQQQVEFLS MKLATVNPE
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021977671.12e-87transcription factor bHLH74 isoform X1
RefseqXP_021977672.12e-87transcription factor bHLH74 isoform X2
RefseqXP_021977673.12e-87transcription factor bHLH74 isoform X3
SwissprotQ6NKN92e-48BH074_ARATH; Transcription factor bHLH74
TrEMBLA0A2U1MCV91e-141A0A2U1MCV9_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGGorai.010G028200.14e-50(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-50bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]