PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan009686
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 179aa    MW: 19486.4 Da    PI: 8.8361
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41889955PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-149002PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.000564057219
               EETTTTEEESSHHHHHHH CS
    zf-C2H2  2 kCpdCgksFsrksnLkrH 19
               +C++Cg s+ ++++L+ H
  Aan009686 40 SCEICGISCDTNEMLNIH 57
               6****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004510.323670IPR003604Zinc finger, U1-type
SMARTSM003559.73963IPR015880Zinc finger, C2H2-like
SuperFamilySSF576678.73E-84071No hitNo description
PfamPF128744.2E-44063No hitNo description
SuperFamilySSF576672.44E-9139174No hitNo description
SMARTSM004510.0081141175IPR003604Zinc finger, U1-type
SMARTSM003553.8144168IPR015880Zinc finger, C2H2-like
PfamPF128742.7E-7146168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
XPVSIPKVVE PVSTPKLVEV LQDSLKKDDK IVVSHEVKPS CEICGISCDT NEMLNIHFTG  60
RKHQKNLKKL IKPSVPHKPV STTDDGGEIA TPMVVDQLQD SLTDDKMVNE GGSIRKGKRA  120
GSQLDIETKK QKIMEVGTAP ASLRACTVCN VVCNSPKVFD YHMAGQKHLA MVAKQGKAQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.4940.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2U1QH781e-120A0A2U1QH78_ARTAN; Zinc finger, C2H2-like protein