PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan009750
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 178aa    MW: 20124.9 Da    PI: 8.2481
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55224064PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-113194PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.00154769123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               ++C+ C++ F++   L  H  +H
  Aan009750 47 FECKTCNRQFPSFQALGGHRASH 69
               89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.92E-745117No hitNo description
PfamPF139122.9E-134671IPR007087Zinc finger, C2H2
SMARTSM003550.164769IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8274774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
PfamPF139121.2E-994119IPR007087Zinc finger, C2H2
SMARTSM003550.2595117IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.26595122IPR007087Zinc finger, C2H2
PROSITE patternPS00028097117IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MVCIPMKRSR GDEFDTTINS MANYLMLLSR GNTNMDSYQD DSVSRVFECK TCNRQFPSFQ  60
ALGGHRASHK KPRLVDGDMT SHHHDSTLLI KPKTHKCSIC GLEFAIGQAL GGHMRRHRAA  120
TTTENHASLP LDLSTPVVKK VNSRRVFSLD LNLTPLENDF EFRVDDEKVT PITVDFFL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024980369.11e-104zinc finger protein ZAT11-like
TrEMBLH2ERN91e-129H2ERN9_CHRMO; Cys2/His2-type zinc finger protein
STRINGXP_009593204.13e-64(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-44C2H2 family protein