PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan010176

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

GRAS

Protein Properties

Length: 166aa MW: 18265 Da PI: 4.4044

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S41947105	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	43.7	4.6e-14	105	166	2	63
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselyka 63 ++lL++cA+a++++d a++l+++l+ ++s +gdp +Rl ay++e+L a+l++s+s++yka Aan010176 105 KKLLIACAKAIAENDSITANWLMSELRPMVSVSGDPDHRLGAYMLEGLVAKLSSSGSSIYKA 166 689********************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	11.581	78	166	IPR005202	Transcription factor GRAS
Pfam	PF03514	1.6E-11	105	166	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence Send to blast
MNRNLYSSPT ASFSSNGSSV SQQDTHSYHP DTYHSPDYTY TSNVSNTGFT DNADDLEYRL 60 RELESAMMGT DQDLMESYDI SSSWGGVNQA TSDVITDMIS RRDFKKLLIA CAKAIAENDS 120 ITANWLMSEL RPMVSVSGDP DHRLGAYMLE GLVAKLSSSG SSIYKA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021978011.1	4e-79	scarecrow-like transcription factor PAT1
TrEMBL	A0A2U1QKG7	1e-114	A0A2U1QKG7_ARTAN; GRAS family transcription factor
STRING	XP_010112792.1	3e-52	(Morus notabilis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48150.2	3e-25	GRAS family protein