PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010269
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family C2H2
Protein Properties Length: 164aa    MW: 19082.1 Da    PI: 4.0389
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55208625PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.0011738122
               EEETTTTEEESSHHHHHHHHHH CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
               + C  Cgk F++  + k+H ++
  Aan010269 17 FYCVACGKKFKSDKQWKNHEQS 38
               78*****************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.69E-141056No hitNo description
SMARTSM004516.4E-41448IPR003604Zinc finger, U1-type
PROSITE profilePS501579.0991746IPR007087Zinc finger, C2H2
PfamPF121714.4E-111742IPR022755Zinc finger, double-stranded RNA binding
PROSITE patternPS0002801941IPR007087Zinc finger, C2H2
PROSITE patternPS0001806678IPR018247EF-Hand 1, calcium-binding site
PfamPF105511.7E-6126162IPR018289MULE transposase domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
ESEVEEEVEV EEKRNEFYCV ACGKKFKSDK QWKNHEQSKK HKEKVAELRD AFSEEDRENE  60
EEEEDDDDED GFVSVDEVEK LKEEFEGVEI RKEEKGGDDE SQSDEEFVDV GNGEKEEDDN  120
EDDEDTTPRV IVTDRDLALV GACRAKFPTA HKVLCRCHIE QNLX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024969963.18e-36DNAJ protein JJJ1 homolog
SwissprotQ9C9112e-15JJJ1_ARATH; DNAJ protein JJJ1 homolog
TrEMBLA0A103YCB12e-34A0A103YCB1_CYNCS; DnaJ domain-containing protein (Fragment)
STRINGMigut.D01668.1.p1e-20(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.11e-15DNAJ heat shock N-terminal domain-containing protein