PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010413
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 159aa    MW: 17410.1 Da    PI: 10.3923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41918326PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-231160991PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.7e-203079255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae Aa+a+++a+ +++g
  Aan010413 30 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEAAARAYDRAAIEFRG 79
               59*******.**********94....36************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.70E-212987No hitNo description
SuperFamilySSF541718.5E-233087IPR016177DNA-binding domain
SMARTSM003808.1E-383093IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.1E-333088IPR001471AP2/ERF domain
PROSITE profilePS5103225.5013087IPR001471AP2/ERF domain
PfamPF008476.1E-143079IPR001471AP2/ERF domain
PRINTSPR003673.3E-123142IPR001471AP2/ERF domain
PRINTSPR003673.3E-125369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
XASAGAGAPV QTGVKAGAGA GGPIKKKKKN YRGVRQRPWG KWAAEIRDPR KAARVWLGTF  60
ETAEAAARAY DRAAIEFRGA RAKLNFPSTD YATTQVSSHE NNQPRVQVSS KRKHETSNEK  120
KPSLEKDISV DDSDDWMNLI MNFSDGFHDS TDGGNVWSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-252787263ATERF1
3gcc_A1e-252787263ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.197540.0trichome
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024979087.15e-45uncharacterized protein LOC112516303
TrEMBLA0A2U1PGI19e-55A0A2U1PGI1_ARTAN; AP2/ERF domain-containing protein
STRINGLus100140545e-39(Linum usitatissimum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.16e-26ERF family protein