PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010516
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB_related
Protein Properties Length: 157aa    MW: 18215 Da    PI: 10.482
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55207592PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.97.5e-11541137
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                     +g+W+ eEd++l+ ++++ G ++W++ +++ g+ R+ 
        Aan010516  5 KGPWSHEEDQILISYIQKNGHPNWRALPKHAGLLRCS 41
                     79******************************88875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.71153IPR017930Myb domain
SuperFamilySSF466891.35E-8239IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.5E-12341IPR009057Homeodomain-like
PfamPF002491.5E-8541IPR001005SANT/Myb domain
CDDcd001674.22E-5736No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MGLNKGPWSH EEDQILISYI QKNGHPNWRA LPKHAGLLRC STSYHRKCLP RNIKFDDEGD  60
NDAATRAWNG LLPKSRALMY CKKHEIINGL GTPARRLKVR NILHSKRDQR SETPKNKKKA  120
DDDLPINFLM KKMNLNKKKD DDDLPINFQM KKMNLGD
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.184610.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024966145.13e-20protein ENHANCED DOWNY MILDEW 2-like
TrEMBLA0A2U1MQK17e-63A0A2U1MQK1_ARTAN; Zinc finger, PHD-type
STRINGXP_007146547.15e-17(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.14e-17myb domain protein 14