PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010636
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family LBD
Protein Properties Length: 153aa    MW: 17293.7 Da    PI: 7.3035
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-23223PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26023.31.7e-0721041100
     DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhkl..FGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                +C +C+ ++r C  +C + +++   + ++f++   l  F ++ v   l++ p    r   ++sl ye + r++    G  +v+ +l  ql+++k+ l+ +
  Aan010636   2 SCVGCRKMNRVCFVGCRFQEVMSGGDVSSFEMESALdkFDVNFVDFCLRSFPLRSdRVSCLKSLSYEKNKRVKHILLGTKQVYDDLIAQLNHEKQLLENA 101
                6*********************9999888877666555*************76665************************************99988888 PP

     DUF260  98 kee 100
                k++
  Aan010636 102 KSH 104
                765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089110.6561105IPR004883Lateral organ boundaries, LOB
PfamPF031952.3E-62101IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MSCVGCRKMN RVCFVGCRFQ EVMSGGDVSS FEMESALDKF DVNFVDFCLR SFPLRSDRVS  60
CLKSLSYEKN KRVKHILLGT KQVYDDLIAQ LNHEKQLLEN AKSHLANIND DIQLAKTSTQ  120
RAYDSLSPIN YNIKLFQDTA AAANQLEGQD SVN