PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan010782
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bZIP
Protein Properties Length: 149aa    MW: 16693.8 Da    PI: 5.2647
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-100661PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.6e-122181363
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
               + ++ rr+++NRe+ArrsR RK++ +  L +   +L +e  +  + +++ ++++ ++++e+
  Aan010782 21 DQRKKRRMISNRESARRSRMRKQKHLNDLMTPLSQLRSEINSVMSSISMTTQHYMSVEAEN 81
               56889**********************************999*******999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-1113103No hitNo description
SMARTSM003385.1E-161983IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.5652184IPR004827Basic-leucine zipper domain
PfamPF001708.3E-92278IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-112376No hitNo description
CDDcd147024.69E-142475No hitNo description
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MASSSGTMTS SGGSDLQEEM DQRKKRRMIS NRESARRSRM RKQKHLNDLM TPLSQLRSEI  60
NSVMSSISMT TQHYMSVEAE NSVLRAQAAE LGHRLESLNE IVAVMERPVE IGSAFGDELT  120
EFGGEFVNDS LSYLYSCQPI LASADMNMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12243RKKRRMISNRESARRSRMRKQK
23542RRSRMRKQ
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in the micropylar endosperm and radicle tip in early germinating seeds. {ECO:0000269|PubMed:23461773}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022036361.12e-75bZIP transcription factor 11-like
SwissprotC0Z2L56e-36BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2U1KSU21e-103A0A2U1KSU2_ARTAN; Basic-leucine zipper domain-containing protein
STRINGXP_009800919.15e-44(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.16e-37G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]