PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan010909

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Dof

Protein Properties

Length: 145aa MW: 16199.7 Da PI: 9.4065

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55110062	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	83.6	2.1e-26	4	45	21	62
zf-Dof 21 ynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s Aan010909 4 YNNYNFSQPRHFCKGCRRYWTHGGTLRDIPVGGGSRKNAKRS 45 9*************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	20.56	1	43	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-16	4	43	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.0E-21	4	43	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence Send to blast
RSTYNNYNFS QPRHFCKGCR RYWTHGGTLR DIPVGGGSRK NAKRSRLSNT STYASNNNTN 60 VVSSSNHLEF RHMAPPTTTL LAPFGGDHLR MCXEFYVLVE WDYWWFFGFE EGFGRGVWPF 120 HGVGIGGGEG GGYVVVGGGG GYVER

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023759730.1	3e-39	dof zinc finger protein DOF3.4-like
TrEMBL	A0A2U1KFN2	2e-60	A0A2U1KFN2_ARTAN; Dof zinc finger protein DOF3.4
TrEMBL	A0A2U1KLJ5	2e-59	A0A2U1KLJ5_ARTAN; Dof zinc finger protein DOF3.4
STRING	Migut.H00486.1.p	6e-35	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	3e-24	OBF binding protein 1