PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011098
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GATA
Protein Properties Length: 139aa    MW: 15879.3 Da    PI: 10.7448
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55037481PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-116378PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA32.21.5e-1016381335
       GATA 13 RrgpdgnktLCnaCGlyyrkkgl 35
               R gpdg+ktLCnaCG++y kk++
  Aan011098 16 RGGPDGPKTLCNACGIKYNKKRR 38
               789*****************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.50.103.1E-61638IPR013088Zinc finger, NHR/GATA-type
PfamPF003203.0E-81638IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
QEAVRIVRQL QLLFGRGGPD GPKTLCNACG IKYNKKRRAQ LRGLDQNGKR IAKSPAKPNS  60
DLKLNVRLMV HNQNXKNHNN NDDRSNFNNN DNEKHCNNNE NENNNSNNKN NNNRERDQHM  120
KEGSHGGTSW GKKSKLLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.13e-09GATA transcription factor 23