PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan011619

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Trihelix

Protein Properties

Length: 122aa MW: 14006 Da PI: 8.9768

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S54983986	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.4	2.5e-20	25	116	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e l+Li+a+r+++++lrrg+l+ ++W++v++ + +++ qC++k+e+l++ry+ +k++e + + +s++ yf+ +ea Aan011619 25 CWSQEEALVLIQAYRDRWHALRRGCLRTADWDAVAEELgricPGVTPPKTSAQCRHKMEKLRQRYRVEKQREMSFgGGQFVSNWFYFEAMEA 116 8***********************************664334444899*****************9997568999*******85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51029	9.002	14	122	IPR006578	MADF domain
Pfam	PF13837	4.5E-18	25	117	No hit	No description
PROSITE profile	PS50090	6.644	26	86	IPR017877	Myb-like domain
SMART	SM00595	2.5E-14	33	122	IPR006578	MADF domain

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence Send to blast
MSGNGIIISG NGGDTKPPRK FPPLCWSQEE ALVLIQAYRD RWHALRRGCL RTADWDAVAE 60 ELGRICPGVT PPKTSAQCRH KMEKLRQRYR VEKQREMSFG GGQFVSNWFY FEAMEALESR 120 DT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023758932.1	2e-57	uncharacterized protein DDB_G0283697
Refseq	XP_024994561.1	6e-58	protein FIP2 isoform X2
TrEMBL	A0A141FQK1	1e-82	A0A141FQK1_CHRMO; Trihelix protein (Fragment)
TrEMBL	A0A2U1QHZ0	3e-84	A0A2U1QHZ0_ARTAN; Trihelix protein
STRING	Solyc08g007170.1.1	1e-39	(Solanum lycopersicum)
STRING	PGSC0003DMT400052836	1e-39	(Solanum tuberosum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	5e-37	Trihelix family protein