PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011806
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 116aa    MW: 13216.1 Da    PI: 10.4813
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S54999769PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.3e-1083115340
                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STC CS
        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsK 40 
                r+h+e+ErrRR+riN  ++ Lr+l+P       +K++K
  Aan011806  83 RNHSEAERRRRERINGHLSMLRSLVPGT-----TKMDK 115
                58************************86.....45555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.44680116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-983116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-783115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-983116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
MDFPPNCFKG FTSSEEHVLK EMMMMSRVRT TSSSSSLVLD NEKGEIVRAL VTPGNIRHTF  60
HDDHDHANLQ KKAKGEKALM ALRNHSEAER RRRERINGHL SMLRSLVPGT TKMDKA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18893ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023737512.12e-42transcription factor bHLH30-like
TrEMBLA0A2U1LH232e-78A0A2U1LH23_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGMigut.M00256.1.p3e-19(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-10bHLH family protein