PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011813
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family GATA
Protein Properties Length: 116aa    MW: 13256 Da    PI: 10.4465
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55080450PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.74.9e-16230735
       GATA  7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35
               t+TplWR gpdg+ktLCnaCG++y kk++
  Aan011813  2 TSTPLWRGGPDGPKTLCNACGIKYNKKRR 30
               89************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501149.565125IPR000679Zinc finger, GATA-type
SMARTSM004011.1E-5141IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.106.5E-12230IPR013088Zinc finger, NHR/GATA-type
SuperFamilySSF577165.23E-9236No hitNo description
PfamPF003201.3E-13230IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    Send to blast
XTSTPLWRGG PDGPKTLCNA CGIKYNKKRR AQLRGLDQNG KRIAKSAVKP NSDLKLNVRL  60
MDIIKIKNHN NSDNKKSCNN NDNRSNFNNN DNEKHCNENE NENNNNNNKN NNNREX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023743848.18e-24GATA transcription factor 15-like
TrEMBLA0A2U1MP443e-37A0A2U1MP44_ARTAN; Zinc finger, GATA-type
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.12e-14GATA transcription factor 23