PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan011944
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bZIP
Protein Properties Length: 112aa    MW: 12494.1 Da    PI: 11.0471
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55104353PU_refUnigeneView CDS
PUT-183a-Artemisia_annua-118046PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.21.1e-153999161
               XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
               +ke kr +r+ +NR++A+  R+RKka++ eLe +vk Le++N++L ++l++l++e + l+ 
  Aan011944 39 DKENKRLKRLLRNRVSAQQARERKKAYLSELEVRVKDLEKKNSELEERLSTLQNENQMLRH 99
               5899****************************************************98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR000415.1E-53854IPR001630cAMP response element binding (CREB) protein
SMARTSM003384.5E-1439103IPR004827Basic-leucine zipper domain
PfamPF001701.7E-1540100IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.70241104IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-1443101No hitNo description
Gene3DG3DSA:1.20.5.1704.0E-1743103No hitNo description
CDDcd147041.38E-164495No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
PRINTSPR000415.1E-55676IPR001630cAMP response element binding (CREB) protein
PRINTSPR000415.1E-57693IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MGGEAAGVSG SGREIGSVAH PVQGSGEGGS RRKGKNPADK ENKRLKRLLR NRVSAQQARE  60
RKKAYLSELE VRVKDLEKKN SELEERLSTL QNENQMLRHI LKNTTAGMQE RK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2oqq_A1e-1864103342Transcription factor HY5
2oqq_B1e-1864103342Transcription factor HY5
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022023437.13e-66transcription factor HY5
SwissprotQ9SM503e-48HY5_SOLLC; Transcription factor HY5
TrEMBLA0A2U1KGX99e-73A0A2U1KGX9_ARTAN; Transcription factor HY5
STRINGPOPTR_0006s26800.15e-53(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.13e-35bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]