PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan012198
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 102aa    MW: 11554.2 Da    PI: 10.6445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55012956PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.75e-142369455
               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                h  +Er+RR+++ ++f  L +llP +     kK++Ka++Le A +YI++Lq
  Aan012198 23 DHVLAERKRREKLAQRFISLSSLLPDL-----KKMDKATVLEDAANYIQELQ 69
               6889***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.3511968IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-162386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-112369IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-172488IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.14E-102473No hitNo description
SMARTSM003531.1E-142574IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MTSLVAGTNK VPAMIRNPIQ VQDHVLAERK RREKLAQRFI SLSSLLPDLK KMDKATVLED  60
AANYIQELQG RVKELEELSG LKRKNMQESV ISAKRSRLSC SX
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732ERKRRE
22833RKRREK
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in flowers. {ECO:0000269|PubMed:12679534}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994959.16e-53transcription factor bHLH18-like
SwissprotQ9T0727e-22BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A2U1LDN18e-59A0A2U1LDN1_ARTAN; Myc-type, basic helix-loop-helix (BHLH) domain-containing protein
STRINGAES907885e-27(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-24bHLH family protein