PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan012518

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

TCP

Protein Properties

Length: 89aa MW: 9810.14 Da PI: 10.807

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S55167903	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	52.5	2e-16	57	89	3	35
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdL 35 + k++++++hTkv+gR+RR+R++a+caar+F+L Aan012518 57 APKRSTKDRHTKVDGRGRRIRMPATCAARVFQL 89 6799****************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	3.6E-12	61	89	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	15.163	62	89	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 89 aa Download sequence Send to blast
MEPTNNHYQQ QQQALPMVAP SATSPPVDPS LAIATRSEEP IKENNQQVAT VTPPPPAPKR 60 STKDRHTKVD GRGRRIRMPA TCAARVFQL

Functional Description ? help Back to Top
Source	Description
UniProt	Can specifically bind site II elements in the promoter region of PP438/PNM1. {ECO:0000269\|PubMed:21297037}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024980203.1	1e-21	transcription factor TCP8
Swissprot	Q9C518	4e-15	TCP8_ARATH; Transcription factor TCP8
TrEMBL	A0A2U1PFL0	1e-42	A0A2U1PFL0_ARTAN; Transcription factor, TCP
STRING	XP_004485466.1	3e-20	(Cicer arietinum)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-17	TCP family protein

Publications ? help Back to Top
Mazur MJ, et al. Arabidopsis TCP Transcription Factors Interact with the SUMO Conjugating Machinery in Nuclear Foci. Front Plant Sci, 2017. 8: p. 2043 [PMID:29250092]