PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan012901
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 69aa    MW: 7885.02 Da    PI: 11.2735
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55183560PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20655255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a+  a+++l+g
  Aan012901  6 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYAGAARSLRG 55
               7********.**********883....5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.3E-13655IPR001471AP2/ERF domain
SMARTSM003802.3E-30669IPR001471AP2/ERF domain
CDDcd000184.18E-18662No hitNo description
PROSITE profilePS5103220.56663IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-21663IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.9E-29662IPR001471AP2/ERF domain
PRINTSPR003671.6E-11718IPR001471AP2/ERF domain
PRINTSPR003671.6E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MASPNHYRGV RKRPWGRYAA EIRDPWKKTR VWLGTFDTPE EAALAYAGAA RSLRGPKAKT  60
TFLLHHSPH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-20264164ATERF1
3gcc_A8e-20264164ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023736733.12e-35ethylene-responsive transcription factor 12-like
SwissprotQ94ID61e-31ERF81_ARATH; Ethylene-responsive transcription factor 12
TrEMBLA0A2J6K8Z65e-34A0A2J6K8Z6_LACSA; Uncharacterized protein
STRINGevm.model.supercontig_27.183e-31(Carica papaya)
STRINGcassava4.1_018002m3e-31(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.12e-27ERF domain protein 12