PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013081
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 291aa    MW: 33066.9 Da    PI: 8.494
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41951697PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-194160997PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.61.3e-1499144555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                hn+ ErrRR+riN+++  L++l+P+a      K +Ka+ L ++++Y+k+Lq
  Aan013081  99 HNQSERRRRERINQKMKALQKLVPNA-----NKTDKASLLDEVIDYLKKLQ 144
                9************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-1991163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.33994143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.17E-1699148No hitNo description
Gene3DG3DSA:4.10.280.101.9E-1799152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.1E-1299144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-16100149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
XKRPRESVII HDQCVGNLGN ASLQEDNVSN SGTVNSKDND TTMMTWPSFD SPNQSMKSQK  60
TDDDSACQYG SENQEEECRT EGETIRSQSS RRSRAAAIHN QSERRRRERI NQKMKALQKL  120
VPNANKTDKA SLLDEVIDYL KKLQSQVQLM KNMPFTPQQM MMSMPLQLQQ QQHQHQQQQQ  180
QQLQMSMLAR MGMGFGLQMG MPGVIPQPVH NPFMVPQTML SPAHVGTTSQ TIHSRPSTNT  240
TVPFNDPHST FLAQQMNMDM YNNMAAFYRQ QVNQGKSMSV DSSQLDHVRG E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024969786.11e-153transcription factor PIF7
TrEMBLA0A2U1MG580.0A0A2U1MG58_ARTAN; Phytochrome-interacting factor7
STRINGEOY219718e-69(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.15e-24bHLH family protein