PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013109
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 159aa    MW: 17971.9 Da    PI: 10.4701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-587160991PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-1750100255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +++GVr+++ +g++ Ae r p++ g  +r +lg+++t+eeAa a+++a+ k +g
  Aan013109  50 KFRGVRRRP-WGKFTAEMRNPVKKG--ARLWLGTYDTPEEAAMAYDRAAFKHRG 100
                89*******.**********76643..************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.9E-2949109IPR001471AP2/ERF domain
CDDcd000181.71E-2850110No hitNo description
SMARTSM003801.1E-3350114IPR001471AP2/ERF domain
PROSITE profilePS5103223.65750108IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2250109IPR016177DNA-binding domain
PfamPF008473.4E-1350100IPR001471AP2/ERF domain
PRINTSPR003674.1E-105162IPR001471AP2/ERF domain
PRINTSPR003674.1E-107490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
XVPLNWDFST GNVVPIAEDN ESQPRAKNSN KLDDAKDIVA KALPSLPERK FRGVRRRPWG  60
KFTAEMRNPV KKGARLWLGT YDTPEEAAMA YDRAAFKHRG SHALLNFPHL IESHNKHPEK  120
YRTKKRAMTV TTSSSSSSSS SDSSKNSFEK RNKSCAYDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2751113668ATERF1
3gcc_A4e-2751113668ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023757561.18e-57ethylene-responsive transcription factor 1-like
TrEMBLA0A2U1KID38e-88A0A2U1KID3_ARTAN; DNA-binding domain-containing protein
STRINGPOPTR_0014s04640.11e-31(Populus trichocarpa)
STRINGXP_008345528.12e-31(Malus domestica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-33ethylene-responsive element binding factor 13