PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013450
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family Trihelix
Protein Properties Length: 161aa    MW: 18316.7 Da    PI: 10.1774
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41951286PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.25.9e-2556138186
   trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                rW+k+ev+aLi +r  + +r+  + +k+  We+v++ +++ g++r+pk+Ckekw+n+nk+y+k+ e        +s+ c yf++le
  Aan013450  56 RWPKSEVQALISVRAALSQRFDGKGSKGSIWEDVAAELSSVGYNRTPKKCKEKWDNINKYYRKTVEKGTA---SKSQVCTYFRELE 138
                8**************************************************************9988776...46778******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.00153115IPR001005SANT/Myb domain
PfamPF138376.5E-2155139No hitNo description
Gene3DG3DSA:1.10.10.602.6E-556112IPR009057Homeodomain-like
PROSITE profilePS500907.63156113IPR017877Myb-like domain
CDDcd122032.79E-2356119No hitNo description
SuperFamilySSF466895.6E-556121IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MNEQARSQEI SRSLALISFI QNTLGQEVQT PKPHNALNLV KKGENKKEEK LKFDARWPKS  60
EVQALISVRA ALSQRFDGKG SKGSIWEDVA AELSSVGYNR TPKKCKEKWD NINKYYRKTV  120
EKGTASKSQV CTYFRELEML NQAKLSSANS HDENQNTKSL H
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024988511.15e-66trihelix transcription factor GTL1
TrEMBLA0A2U1MU061e-113A0A2U1MU06_ARTAN; Trihelix protein
STRINGXP_007147613.14e-41(Phaseolus vulgaris)
STRINGXP_009771160.19e-41(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.12e-26Trihelix family protein