PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013749
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family NAC
Protein Properties Length: 430aa    MW: 48667.4 Da    PI: 4.2938
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-754160994PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.41.4e-53131401128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                l+pGfrFhPtdeelv +yL++kv g++++l ++i++vd+ykvePwdLp+  ++k+++ ewyfFs  dkky +g+r+nrat++gyWk+tgkd++v+  ++e
  Aan013749  13 LAPGFRFHPTDEELVRYYLRRKVCGQPFRL-DAISDVDVYKVEPWDLPAlsRLKTRDLEWYFFSVLDKKYGNGSRTNRATEKGYWKTTGKDRTVYF-RSE 110
                579***************************.99***************4458888888**************************************.999 PP

        NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                l+g+kktLv+++grapkge+t+Wvmheyrl
  Aan013749 111 LTGMKKTLVYHSGRAPKGERTNWVMHEYRL 140
                ****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-639163IPR003441NAC domain
PROSITE profilePS5100558.28813163IPR003441NAC domain
PfamPF023651.4E-2715140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MALRIDSVSA SSLAPGFRFH PTDEELVRYY LRRKVCGQPF RLDAISDVDV YKVEPWDLPA  60
LSRLKTRDLE WYFFSVLDKK YGNGSRTNRA TEKGYWKTTG KDRTVYFRSE LTGMKKTLVY  120
HSGRAPKGER TNWVMHEYRL IDKELESAGV VQDAFVLCRI FHKSGSGPKN GEKYGAPLIE  180
EEWDEEESIF VPKQEDFTEE FPVDMDSFLD ANELAQIMHT DMPGQDGPRP LSFYQADNIN  240
YADVSTAVTN DPQNSLVSVG EYSPQVDESD GSKSFGLPLQ TVLDPVSVDH GYIGEPSNPT  300
NFDLDSFINE SFFDAAGEFS HDDSLYFQAD DFNTDSGLDM LNEYFNKNID NFQYSLDSTG  360
DKNIFPDSFL NLENVTDGTN QVSXIASQQF EGQNDYIAPY SKQEHPAQEA DIAHPFLKKA  420
SYMLGNIAAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-49616910171NO APICAL MERISTEM PROTEIN
1ut4_B3e-49616910171NO APICAL MERISTEM PROTEIN
1ut7_A3e-49616910171NO APICAL MERISTEM PROTEIN
1ut7_B3e-49616910171NO APICAL MERISTEM PROTEIN
3swm_A3e-49616913174NAC domain-containing protein 19
3swm_B3e-49616913174NAC domain-containing protein 19
3swm_C3e-49616913174NAC domain-containing protein 19
3swm_D3e-49616913174NAC domain-containing protein 19
3swp_A3e-49616913174NAC domain-containing protein 19
3swp_B3e-49616913174NAC domain-containing protein 19
3swp_C3e-49616913174NAC domain-containing protein 19
3swp_D3e-49616913174NAC domain-containing protein 19
4dul_A3e-49616910171NAC domain-containing protein 19
4dul_B3e-49616910171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021976897.10.0NAC domain-containing protein 78
TrEMBLA0A2U1MGJ90.0A0A2U1MGJ9_ARTAN; NAC domain containing protein 2
STRINGMigut.F01687.1.p1e-132(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-106NAC domain containing protein 53