PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014225
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family HD-ZIP
Protein Properties Length: 271aa    MW: 30278.3 Da    PI: 8.9779
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41968433PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-17128PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-18125179256
                T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                rk+ ++tk q   Le++F+ +++++ ++++eLA++l+L  rqV vWFqNrRa+ k
  Aan014225 125 RKKLRLTKAQSALLEQAFKHHSTLNPKQKQELARELKLRPRQVEVWFQNRRARTK 179
                678899***********************************************98 PP
2HD-ZIP_I/II121.93.2e-39125214191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kk+rl+k q++lLE+ F+++++L+p++K+elareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++lkeen+rL+ke +eL+ +l
    Aan014225 125 RKKLRLTKAQSALLEQAFKHHSTLNPKQKQELARELKLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLKEENTRLHKELQELK-AL 214
                  69*************************************************************************************9.55 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007116.86121181IPR001356Homeobox domain
SuperFamilySSF466893.55E-18123182IPR009057Homeodomain-like
SMARTSM003899.8E-16123185IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.3E-18124184IPR009057Homeodomain-like
PfamPF000466.5E-16125179IPR001356Homeobox domain
CDDcd000861.59E-15125182No hitNo description
PROSITE patternPS000270156179IPR017970Homeobox, conserved site
SMARTSM003403.5E-20181226IPR003106Leucine zipper, homeobox-associated
PfamPF021832.9E-10181215IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MGFDSVCNKG LVLELGLNSS MVENNATNTT RKPCNNLNFD PTLTLTLSSD HDHGVNKRKH  60
ACVGGGGGDH HGGLYRQDSV SGGGSSFSVA SVSVKREREV KSEESERVIS ATSVEEDDDG  120
IINGRKKLRL TKAQSALLEQ AFKHHSTLNP KQKQELAREL KLRPRQVEVW FQNRRARTKL  180
KQTEVDCEYL KKCCETLKEE NTRLHKELQE LKALKMSPTK PLYMQLPAAT LTMCPSCERI  240
GDTTSTTKTR PFTMDTKPHF FNPFTNPSPA C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173181RRARTKLKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022021369.11e-145homeobox-leucine zipper protein HAT9-like isoform X2
SwissprotP466041e-84HAT22_ARATH; Homeobox-leucine zipper protein HAT22
TrEMBLA0A2U1Q6G90.0A0A2U1Q6G9_ARTAN; HD-ZIP protein
STRINGEOX917921e-104(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.12e-79HD-ZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Liu T,Longhurst AD,Talavera-Rauh F,Hokin SA,Barton MK
    The Arabidopsis transcription factor ABIG1 relays ABA signaled growth inhibition and drought induced senescence.
    Elife, 2017.
    [PMID:27697148]
  3. Song L, et al.
    A transcription factor hierarchy defines an environmental stress response network.
    Science, 2017.
    [PMID:27811239]