PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014238
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 204aa    MW: 22367.3 Da    PI: 5.2503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41920879PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-55992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.5e-154997255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                y+G+r +   g+Wv+eIr+p     +   r++lg++ t+e+Aa+a++ a+++l+g
  Aan014238 49 VYHGIRLR--AGKWVSEIREP-----NkpSRIWLGTYPTPEMAAAAYDVAALALKG 97
               7999*875..6*********9.....448************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-2549107IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1749107IPR016177DNA-binding domain
SMARTSM003806.3E-2549111IPR001471AP2/ERF domain
PROSITE profilePS5103218.88749105IPR001471AP2/ERF domain
PfamPF008479.0E-94997IPR001471AP2/ERF domain
CDDcd000181.26E-1450107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
XDIQPRYNKT LYCMANYSRR RNSSASQQPE NNNNNPPVTA GSSSTRHTVY HGIRLRAGKW  60
VSEIREPNKP SRIWLGTYPT PEMAAAAYDV AALALKGTDT KLNFPDSILS NTLPECPTTD  120
EIRAAAARAA AARDPTNQSG YGSSSGIGTN PHDQYMDHED VFGMPNMLSD MAEGMLLSPP  180
RINSSPPDDG TDYNYSGGEN LWDY
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.50500.0trichome
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023754821.11e-75ethylene-responsive transcription factor ERF024-like
SwissprotQ9FJ902e-38ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLM4IWN61e-138M4IWN6_ARTAN; Ethylene-responsive transcription factor 8
STRINGVIT_16s0100g00400.t013e-47(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-33ERF family protein
Publications ? help Back to Top
  1. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]