PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014331
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family MYB
Protein Properties Length: 324aa    MW: 35524.2 Da    PI: 9.6063
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41963935PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-37992PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08126167240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W +eE ell ++v+++++g   +W+ I++++g+gR+ +++
        Aan014331 126 KPWGKEEVELLRKGVAKFPKGtsrRWEVISEYIGTGRSVEEI 167
                      58************************************9876 PP
2Myb_DNA-binding24.56.4e-08269312344
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 
                       W+t     lv+a k ++++   +W++Ia+ ++ g+t +qck  +
        Aan014331 269 EWSTVQVTSLVQAMKTFPKEanqRWERIAAAVP-GKTVNQCKKQF 312
                      799***************99*************.********877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.005120175IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.1E-5120167IPR009057Homeodomain-like
SuperFamilySSF466895.01E-8121168IPR009057Homeodomain-like
SMARTSM007172.6E-6124177IPR001005SANT/Myb domain
PfamPF002492.9E-7126167IPR001005SANT/Myb domain
CDDcd001675.81E-6127167No hitNo description
PROSITE profilePS500906.586262316IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.601.4E-5266316IPR009057Homeodomain-like
SMARTSM007174.5E-7266318IPR001005SANT/Myb domain
SuperFamilySSF466893.29E-9268323IPR009057Homeodomain-like
PfamPF002498.1E-6269312IPR001005SANT/Myb domain
CDDcd001671.05E-5269316No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
XKXEEEEXQA AEAAALQKKX REXEKXLLRX ERTRLRTLST SVVSQHLLNL NEDDVESLCM  60
SLDMLALQTL CDNMETKEES EQAKLLGEAL GNSDRSHRDF SSTNGKQNGS VKVNGNALKS  120
TPKKNKPWGK EEVELLRKGV AKFPKGTSRR WEVISEYIGT GRSVEEILKA TKTVLLQKPD  180
SSKAFDTFLD KRKPAQSISS PLSTREEVEG VSSNSTPVEG VSSKPSQTKD KNMANGVANG  240
VANGVANGVA NGVADGVANG VNADADSDEW STVQVTSLVQ AMKTFPKEAN QRWERIAAAV  300
PGKTVNQCKK QFTLLKDKFR NKKN
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.37850.0leaf
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024995474.11e-128dnaJ homolog subfamily C member 2-like
TrEMBLA0A2U1QIS20.0A0A2U1QIS2_ARTAN; DnaJ domain-containing protein
STRINGXP_010067661.11e-112(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.15e-84DnaJ domain ;Myb-like DNA-binding domain