PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014333
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family G2-like
Protein Properties Length: 163aa    MW: 18162.7 Da    PI: 5.5936
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S55084677PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-132207PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.11.9e-232431455
    G2-like 14 FveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
               Fv+ave LGG+e AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Aan014333  2 FVHAVELLGGHEGATPKSVLELMDVKDLTLSHVKSHLQMYRT 43
               *****************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015575.2E-17243IPR006447Myb domain, plants
SuperFamilySSF466898.06E-9244IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-19243IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
XFVHAVELLG GHEGATPKSV LELMDVKDLT LSHVKSHLQM YRTVKTTDRA PASSGQSDMY  60
ENGSSGDNSD DIMFDIRNPR TTELSAENGG KSSVNQDKDY QYGLWSNSSR EAWLHGEHRD  120
SEGNKPLLEK EMNSKGLNYE RLSEVSSSSP KKPNLEFTLG RPQ
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in developing phloem. {ECO:0000269|PubMed:14561401}.
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that regulates lateral organ polarity. Promotes abaxial cell fate during lateral organd formation. Functions with KAN1 in the specification of polarity of the ovule outer integument. {ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024994688.11e-107probable transcription factor KAN2 isoform X1
RefseqXP_024994689.11e-107probable transcription factor KAN2 isoform X1
SwissprotQ9C6161e-50KAN2_ARATH; Probable transcription factor KAN2
TrEMBLA0A2U1PDR51e-112A0A2U1PDR5_ARTAN; Homeodomain-like superfamily protein
TrEMBLA0A2U1QD821e-111A0A2U1QD82_ARTAN; Homeodomain-like superfamily protein
STRINGVIT_02s0012g01940.t019e-81(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.14e-53G2-like family protein
Publications ? help Back to Top
  1. Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
    The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
    Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
    [PMID:26108442]