PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan014388

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

Trihelix

Protein Properties

Length: 315aa MW: 34769.4 Da PI: 9.9188

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Aan#S54981261	PU_unref	Unigene	View CDS
gnl\|UG\|Aan#S55197561	PU_unref	Unigene	View CDS
PUT-183a-Artemisia_annua-106160988	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	96.9	1.9e-30	64	147	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m+ ++r+++lk+plW+evs+k++e g++rs+k+Ckek+en+ k++k++keg+ ++ + +t+++fdql+ Aan014388 64 RWPRQETLALLKIRSDMDVAFRDSSLKGPLWDEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTSK--ADGKTYRFFDQLQ 147 8******************************************************************96..66678****98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.888	57	121	IPR017877	Myb-like domain
SMART	SM00717	4.2E-4	61	123	IPR001005	SANT/Myb domain
CDD	cd12203	9.12E-29	63	128	No hit	No description
Pfam	PF13837	5.8E-20	63	149	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence Send to blast
MLQGAPPGLT NNPGDSPAAS TQPHDTAATV SGGGAELAGS GGSGFSEDER GRIDDGGRNS 60 GGNRWPRQET LALLKIRSDM DVAFRDSSLK GPLWDEVSRK LAELGYHRSA KKCKEKFENV 120 YKYHKRTKEG RTSKADGKTY RFFDQLQALE GSPATGMSHH QQQQQHQPPS TQHQHPVVSK 180 PVQVSPMPNT QVPSVVIPTN VTNATGSHQN NVDPISVAAP AVTMPATMSI NHVAGFPFSQ 240 LNLSVSTNSS SSSTSSDDDV APERRRNKKR KWKEFFGKLM KEVIDKQEEL QSKFLDSLER 300 RERDRMAREE AWRMX

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	270	RRNKKRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_023742465.1	1e-135	trihelix transcription factor GT-2-like isoform X1
Refseq	XP_023742466.1	1e-135	trihelix transcription factor GT-2-like isoform X2
TrEMBL	A0A141FQL4	0.0	A0A141FQL4_CHRMO; Trihelix protein (Fragment)
STRING	XP_006473053.1	3e-85	(Citrus sinensis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-51	Trihelix family protein