PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014545
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 227aa    MW: 25284.8 Da    PI: 5.77
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-614160995PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36.1e-212574255
        AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Aan014545 25 RYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAALSLRG 74
               59*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.77E-192582No hitNo description
PfamPF008471.1E-132574IPR001471AP2/ERF domain
SMARTSM003808.5E-362588IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-312582IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-222583IPR016177DNA-binding domain
PROSITE profilePS5103223.672582IPR001471AP2/ERF domain
PRINTSPR003677.4E-112637IPR001471AP2/ERF domain
PRINTSPR003677.4E-114864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MPRGRPTTGA ATTKPDVPGS GPDIRYRGVR KRPWGRYAAE IRDPWKKTRV WLGTFDSAED  60
AARAYDAAAL SLRGPKARTN FAFHTTEPIN GINNNGNNNY YQYHNNSLLS YNNGLNQVPG  120
EYQNNNIVRP TCSSLSSTLE SFSGPRPMTT NNVVRLAQRQ EESRRRVDDC RSDCDSSSSV  180
VDDDDGVLGH EDGVVCSSFS KPFLSFDLNM PPPFEEDDDI DCTVLRL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-202681359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A6e-2025811471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024977384.12e-54ethylene-responsive transcription factor 3
TrEMBLA0A2U1MSW41e-121A0A2U1MSW4_ARTAN; AP2/ERF domain-containing protein
STRINGPGSC0003DMT4000373593e-48(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.17e-23ethylene responsive element binding factor 3