PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan014635
Organism
Artemisia annua
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family bHLH
Protein Properties Length: 261aa    MW: 28934.5 Da    PI: 6.1718
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Aan#S41897071PU_unrefUnigeneView CDS
PUT-183a-Artemisia_annua-410160989PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09107154455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +h+ +Er RR++iN ++  L+el+P +    +k    a++L + +++++sLq
  Aan014635 107 SHSLAERARREKINARMKLLQELVPGC----NKISGTAMVLDEIINHVQSLQ 154
                8*************************9....89999***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.08E-9101158No hitNo description
SuperFamilySSF474592.75E-15101170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.634103153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-15103169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-7107154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-9109159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
XLDRSSFTAL LELPANQVVK LLDSPVGFPV PEGGNNDVNL VKEEPVELRN SEDSDPVVSK  60
SVKRKEREKK VKLPVKKSKN VVNESDGDKE KLPYVHVRAR RGQATDSHSL AERARREKIN  120
ARMKLLQELV PGCNKISGTA MVLDEIINHV QSLQRQVEFL SMRLAAVHPS IDINIDNMFS  180
AESGSLMDCN FHGMVSPPLS LDGQINGHSQ QLWQPDGLPP QPLWGAEEVN PNFITPENSL  240
LSYDSSGNSA SLHTNQLKME L
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Aan.186890.0leaf
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021971622.11e-129transcription factor bHLH48-like
SwissprotQ8VZ023e-60BH048_ARATH; Transcription factor bHLH48
TrEMBLA0A2U1MS850.0A0A2U1MS85_ARTAN; Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRINGEOY094031e-107(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-64bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]