PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aan014676

Organism

Artemisia annua

Taxonomic ID

35608

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia

Family

bHLH

Protein Properties

Length: 211aa MW: 23779.9 Da PI: 4.3769

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-183a-Artemisia_annua-114138	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.8	5.2e-05	160	197	13	54
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R+++++ Lr ++P ++ ++ +++L +Av+Y+ksL Aan014676 160 REKMRKMVRSLRGIVPGG----NRQMNTVTVLDEAVKYLKSL 197 788888999999999997....799***************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.512	147	197	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.3E-4	156	203	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	5.87E-6	158	202	No hit	No description
Gene3D	G3DSA:4.10.280.10	7.4E-8	158	203	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.7E-8	160	203	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MQGDEQNFPQ NGAPPFADQM GSGYSPDPYM SSFFGQNVDF QPSQDCPRNY IIFDRTDNHS 60 QIMYNPGLNV GAPYFPYNTM MHNDINAPRH MKEDSADIDA LLSCEDEDEE EEYEEEEEVS 120 TARTDRNDTS DTSDSCSSRP TNSRFDSTSS QEPKGTDRKR EKMRKMVRSL RGIVPGGNRQ 180 MNTVTVLDEA VKYLKSLKVE AQKRGVGNSS G

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_022035477.1	2e-89	transcription factor bHLH144-like
Refseq	XP_022035478.1	2e-89	transcription factor bHLH144-like
Refseq	XP_022035479.1	2e-89	transcription factor bHLH144-like
TrEMBL	A0A251V0E7	4e-88	A0A251V0E7_HELAN; Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein
STRING	XP_002519719.1	2e-49	(Ricinus communis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29950.2	1e-12	bHLH family protein